PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY45820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 431aa MW: 48810.3 Da PI: 5.9016 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41 | 3.4e-13 | 210 | 277 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC................TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas.............kapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ +++Lr+l+P+a+ + +K + a+i A++++k+L+ GAY45820.1 210 QRMTHIAVERNRRRQMNDHLNTLRSLMPPAYvqrvkqsnnpsdvLNITTKGDQASIIGGAIDFVKELE 277 79***************************877************9999****************9995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 431 aa Download sequence |
MEKLQGPINP YFLGDHLSVE CFEQEFINTG ALRFEFEEED EEGPQFTTTP SLEDKMPFLQ 60 MLQSVGTPSV FPFKEPNFQT LLRLQHLKKP WELVSPFMPE MEETQIQALE FESCVTQETL 120 DLHSPVKLET KDLQNPHSVT SCIEGLSSES NQEHIQVQPN SDSVINITHP PQQQIRAKQS 180 QFSKSPPITR EKRKRKRTKP IKNKEEVESQ RMTHIAVERN RRRQMNDHLN TLRSLMPPAY 240 VQRVKQSNNP SDVLNITTKG DQASIIGGAI DFVKELEQLL QSLEAQKRMR MGTTSAATLE 300 GCDSATSTTT TTTTTDKAIL SNVYSMSRPE IGNCEEKMKA ESKLDGAEIE VIVIHNHVNL 360 KIHSPRRPGQ LLKAIVALED LRLTFLHLNI TSSETTVHYS FNLKIEEDCK LGSAEEIAAA 420 VHQIFSYING S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 193 | 200 | RKRKRTKP |
2 | 211 | 222 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46810.1 | 1e-63 | bHLH family protein |