PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45801.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 399aa MW: 45021.7 Da PI: 6.7544

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45801.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.7	4e-52	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv+++k++l +vi++vd++k+ePwd+++k+k +++ +wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + GAY45801.1 15 VPPGFRFHPTEEELLHYYLRKKVSSEKIDL-DVIRDVDLNKLEPWDIQEKCKIGSTpqsDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIHS-N 111 69**************************.9***********9655543333359*******************************99.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfykgrap+g+k+dW+mheyrl GAY45801.1 112 CRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 143 889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MPESMSISVN GQSQVPPGFR FHPTEEELLH YYLRKKVSSE KIDLDVIRDV DLNKLEPWDI 60 QEKCKIGSTP QSDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIHS NCRRIGMRKT 120 LVFYKGRAPH GQKSDWIMHE YRLDDNPNEI TNVSNVMGDA TQEESWVVCR IFKKKDHHKT 180 LGSPTSSSIN GNRMFNSCNE GSLEQILQHM GGTCKEESDE PNNNLRLYRA ILGTGTGGFD 240 HNDPFLKLPS LRSPNSSGSQ NNYHHYPMPM VTEIGGSVSN QVSSSNLNNS VYHTETESSS 300 GLTSWAALDR LVASQLNGQT ETSRQLACFN EPTMAPYCNP TDDDHQHDFQ LPPLRSSSIL 360 SSNSSYHGSE DYNNEIDIWN YTRSSSSSDP LCHASNNRL

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MPESMSISVN GQSQVPPGFR FHPTEEELLH YYLRKKVSSE KIDLDVIRDV DLNKLEPWDI  60
QEKCKIGSTP QSDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIHS NCRRIGMRKT  120
LVFYKGRAPH GQKSDWIMHE YRLDDNPNEI TNVSNVMGDA TQEESWVVCR IFKKKDHHKT  180
LGSPTSSSIN GNRMFNSCNE GSLEQILQHM GGTCKEESDE PNNNLRLYRA ILGTGTGGFD  240
HNDPFLKLPS LRSPNSSGSQ NNYHHYPMPM VTEIGGSVSN QVSSSNLNNS VYHTETESSS  300
GLTSWAALDR LVASQLNGQT ETSRQLACFN EPTMAPYCNP TDDDHQHDFQ LPPLRSSSIL  360
SSNSSYHGSE DYNNEIDIWN YTRSSSSSDP LCHASNNRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-123	NAC family protein