PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY45575.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 337aa    MW: 36925.5 Da    PI: 4.8048
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY45575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.31.3e-13102153155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI++Lq
  GAY45575.1 102 QRMSHITVERNRRKQMNENLSLLRSLMPCF---YVKRGDQASIIGGVVDYINELQ 153
                 79***************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MGGVGDDTLS EYFFDEGETN LAEDDLFAIF ESLDSVTPLD EAATAVSEAR LVSQKSTSSS  60
ILQESDETDQ LTETLPKNKR QKTAATAAVN SSDEANNTDG QQRMSHITVE RNRRKQMNEN  120
LSLLRSLMPC FYVKRGDQAS IIGGVVDYIN ELQQVLQSLE AKKQRKVYCE VLSPRLVSSP  180
RPSPLSPRKP PLSPRLNLPI SPRTPQPGSP YKPRLQQQGY LSPTKATNNN SVEPSPCSSS  240
TSSIDSINEL VANSKSAIAD VEVKFSGPNL LLKTVSPRIP GQAVKIISAL EDLAFEILHV  300
NISTVDETMH NSFTIKIGIE CQLSAEELAQ QIQQTFC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103114RMSHITVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.14e-98bHLH family protein