PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45296.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

ARR-B

Protein Properties

Length: 626aa MW: 69068.9 Da PI: 5.0307

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	59.1	9.8e-19	187	230	1	45
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 kpr++Wt+eLH++F+ av+ L G +kA+Pk+il+lm+v+gLt+e+ GAY45296.1 187 KPRVVWTTELHTKFIGAVNLL-GLDKAVPKKILDLMNVEGLTREN 230 79*****************.******************986 PP
2	Myb_DNA-binding	23.9	9.7e-08	189	229	1	38
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlk 38 r WTte++ +++ av++lG + +k+I m+ +g+t++ GAY45296.1 189 RVVWTTELHTKFIGAVNLLGLDkaVPKKILDLMNvEGLTRE 229 678********************************999986 PP
3	Response_reg	61.9	3.3e-21	26	132	1	110
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+++ +++l+++l++ +y ev+++ + al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp++ + + +++ + ++ Ga GAY45296.1 26 VLAVDDDQTCLKILEKFLRECQY-EVTVTNRAITALKMLRENRnnFDLVISDVYMPDMDGFKLLELVGL-EMDLPVVTYS---DTKLVMKGINHGAC 117 799******************.***********999889***************97754.4589988...6679******* PP EEEESS--HHHHHHH CS Response_reg 96 dflsKpfdpeelvka 110 d+l Kp+ +eel ++ GAY45296.1 118 DYLLKPVRMEELKNT 132 **********876 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MTAEEKGGSS SDEDGVIDKF PIGMRVLAVD DDQTCLKILE KFLRECQYEV TVTNRAITAL 60 KMLRENRNNF DLVISDVYMP DMDGFKLLEL VGLEMDLPVV TYSDTKLVMK GINHGACDYL 120 LKPVRMEELK NTWQHVIRRK KVDPKDQNRS PHEFEKSYRK RKDQDGDEDE DGDDDGHENE 180 NSTTQKKPRV VWTTELHTKF IGAVNLLGLD KAVPKKILDL MNVEGLTREN KFRLSLKRLG 240 NKTLEAGMVA SVGSKDSSYL RIGALDGFGG SHSVNSPGRL SSSALSSSYV PGSMIGRLNS 300 SAGLSMHGIA SSGMIKPGLS QSFNTSFNTI GKNQQAMFPA NRNSNLVQGV QTSLEPNQMP 360 QSESTTHIGD FNHINSPTAF TAATGFIDAR VAVGSSSSSV STSLSNLMML QANPHQAQSR 420 DAYGNQSSLT VASLNQAYFD VGVHDSSNFL DHGRCQESWQ DAVQLSKSSS ISLPLGEPFI 480 LDQVPPNNLD NILSSNCYLD ISSSIANSTY LENSRGDLSY QPGMIGNEIQ NYASKQWMEH 540 KQDYNQNIDH PVSNVNSLLC SNYTMGPFSS SMNQSNSPYV AQHTGVEKAS LDTNLRSNDD 600 FLLEQSACHD GFMQNNYDPI YDECND

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MTAEEKGGSS SDEDGVIDKF PIGMRVLAVD DDQTCLKILE KFLRECQYEV TVTNRAITAL  60
KMLRENRNNF DLVISDVYMP DMDGFKLLEL VGLEMDLPVV TYSDTKLVMK GINHGACDYL  120
LKPVRMEELK NTWQHVIRRK KVDPKDQNRS PHEFEKSYRK RKDQDGDEDE DGDDDGHENE  180
NSTTQKKPRV VWTTELHTKF IGAVNLLGLD KAVPKKILDL MNVEGLTREN KFRLSLKRLG  240
NKTLEAGMVA SVGSKDSSYL RIGALDGFGG SHSVNSPGRL SSSALSSSYV PGSMIGRLNS  300
SAGLSMHGIA SSGMIKPGLS QSFNTSFNTI GKNQQAMFPA NRNSNLVQGV QTSLEPNQMP  360
QSESTTHIGD FNHINSPTAF TAATGFIDAR VAVGSSSSSV STSLSNLMML QANPHQAQSR  420
DAYGNQSSLT VASLNQAYFD VGVHDSSNFL DHGRCQESWQ DAVQLSKSSS ISLPLGEPFI  480
LDQVPPNNLD NILSSNCYLD ISSSIANSTY LENSRGDLSY QPGMIGNEIQ NYASKQWMEH  540
KQDYNQNIDH PVSNVNSLLC SNYTMGPFSS SMNQSNSPYV AQHTGVEKAS LDTNLRSNDD  600
FLLEQSACHD GFMQNNYDPI YDECND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	2e-92	ARR-B family protein