PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY45017.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 422aa MW: 46813.1 Da PI: 8.3574

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY45017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	85.9	7.5e-27	8	101	30	121
NAM 30 leevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdW 121 + ++i++v d++k+ePwdLp+ ++ +e++ wyfF +k++++k nr+t+sg+Wk tgkd+ + +++g+++g kk Lvf++gra++g +t+W GAY45017.1 8 A-HTIADVvDVCKYEPWDLPQrsRMPKEDRVWYFFNALVSKSPNSKLVNRQTNSGFWKPTGKDRVIWDEQGKKIGFKKNLVFHTGRAKNGIRTNW 101 4.3455555********95357777999*************************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MCGLDFPAHT IADVVDVCKY EPWDLPQRSR MPKEDRVWYF FNALVSKSPN SKLVNRQTNS 60 GFWKPTGKDR VIWDEQGKKI GFKKNLVFHT GRAKNGIRTN WKEFVLLRLK KKSGDKPDAC 120 NEPTPQPSAF DSGNGAIGNT NPQINRDLPE ELQLLLSNPE LDYSHLAEVL SNIQPAQGTS 180 INSKHGTSYS DGFNDELETS GQEDAFVNSL WACQAECSGE RSMNTLRHDF NPTISLRGRS 240 IGQSSDADSK IYQQHGKVPG TSNVFYEKTH AQMETVWALS ETSSSSEGYG IMDFDVSSVN 300 SDTDLPGIAG HESFVDELQH TPKLHKYFEE RCSTQELKTQ RKVSNKAVSK VEMGEAVHHA 360 VDLPRTEKAT VRLVKDKKLA QKTRARKDSS SGSNGSTSSS KKKLYISSLT AASDGAGSSN 420 KR

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MCGLDFPAHT IADVVDVCKY EPWDLPQRSR MPKEDRVWYF FNALVSKSPN SKLVNRQTNS  60
GFWKPTGKDR VIWDEQGKKI GFKKNLVFHT GRAKNGIRTN WKEFVLLRLK KKSGDKPDAC  120
NEPTPQPSAF DSGNGAIGNT NPQINRDLPE ELQLLLSNPE LDYSHLAEVL SNIQPAQGTS  180
INSKHGTSYS DGFNDELETS GQEDAFVNSL WACQAECSGE RSMNTLRHDF NPTISLRGRS  240
IGQSSDADSK IYQQHGKVPG TSNVFYEKTH AQMETVWALS ETSSSSEGYG IMDFDVSSVN  300
SDTDLPGIAG HESFVDELQH TPKLHKYFEE RCSTQELKTQ RKVSNKAVSK VEMGEAVHHA  360
VDLPRTEKAT VRLVKDKKLA QKTRARKDSS SGSNGSTSSS KKKLYISSLT AASDGAGSSN  420
KR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	5e-24	NAC family protein