PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44617.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 230aa    MW: 25459.5 Da    PI: 7.7937
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44617.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.4e-07831221054
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 + RR+ri +++  L+el+P++      K + a++L + v+Y+k L
  GAY44617.1  83 QLRRERIADRMRALQELVPSC-----NKTDRAAMLDEIVDYVKFL 122
                 56******************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MQFQSQPVAA PQPPAVRPRV RARRGQATDP HSIAERTNCL LSDIALMVKV SMLIMVYNYS  60
SQHSMAVCLC CHQQMFSLFF VVQLRRERIA DRMRALQELV PSCNKTDRAA MLDEIVDYVK  120
FLRLQVKVLS MSRLGAAGAV AQLVADVPLS SALEGESIDG GSTQPEWEKW SNDGTEQQVA  180
KLMEEDIGAA MQFLQSKALC IMPISLASAI YRTRQPDAPA FVKPESSTPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.32e-61bHLH family protein