PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44517.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 331aa MW: 37052.8 Da PI: 8.7666

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44517.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178	2.5e-55	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhP+deel+++yL +k+++ +++ ++i++vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ ++e GAY44517.1 10 LPPGFRFHPSDEELITYYLVNKISDASFTG-RAIADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSvTSE 107 79***********************999.89***********99999************************************998999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 lvg+kktLvfy+grap+gekt+Wvmheyr+ GAY44517.1 108 LVGMKKTLVFYRGRAPRGEKTNWVMHEYRI 137 9*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MEGDKKEETL PPGFRFHPSD EELITYYLVN KISDASFTGR AIADVDLNKC EPWDLPGKAK 60 MGEKEWYFFS LRDRKYPTGV RTNRATNTGY WKTTGKDKEI FNSVTSELVG MKKTLVFYRG 120 RAPRGEKTNW VMHEYRIHSK SAFRTSKDEW VVCRVFQKSA GAKKFPTNQS RAVNPAYNLD 180 IGASVIPPQM IQAENFQFPV GRNYTGNADQ LAEFTRMFRG GASSSVNNNF PIQSQMNYPL 240 AGGFTISGLN LNLGGATTQP VLRPMPPPPP HPQAMHQEEV TCSMMTSSAY AADQSLTGYA 300 AEINQANGAA GGSRYMSLEH CMDLDSYWPP Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-118	NAC family protein