PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY44170.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 160aa    MW: 18317.9 Da    PI: 10.1712
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY44170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.88.8e-233510655128
         NAM  55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +e yfF++ +++  +  +++r+tksgyWk tgk ++++  +++ vg kk+Lvfy+g+ p+g++++Wvmhe+r+
  GAY44170.1  35 PDEGYFFTQLENRDGK-GQPKRTTKSGYWKDTGKVEQIIW-NNSIVGFKKILVFYEGKPPTGTRSRWVMHEFRV 106
                 4578******999876.58999*****************9.8999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MASQGVFGSI NQEEEFDLPL GYRFSPNGEF KNCKPDEGYF FTQLENRDGK GQPKRTTKSG  60
YWKDTGKVEQ IIWNNSIVGF KKILVFYEGK PPTGTRSRWV MHEFRVNPSY LSAFALDITT  120
QTEVVNYVAC KIHHKKESGN KRSEAGKKKN LPVRKKTKAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.17e-21NAC family protein