PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY44165.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 202aa MW: 23267.6 Da PI: 9.4141 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 92.5 | 6.8e-29 | 44 | 173 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 +p+G+rF P+d+++++ yL k+ g+k++ ik++d+ +++P+d + + +e+yf++ +k +g ++ +tk+gyW+a g d +v+s + GAY44165.1 44 VPVGIRFFPRDHQVIQPYLLSKILGTKHTPLYPIKDMDLSTFDPNDVVFDERCRANETYFYAWLVNKRGKGMVQRVVTKRGYWEADGVDVPVYSDreMK 142 599***********************9888788**************865556789*************9999999******************84444 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 vg kk +fy g++p+g+k+ W m eyr+ GAY44165.1 143 VMVGFKKNWTFYLGTEPEGQKSAWSMTEYRV 173 559**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MSSSLPPASS SSNKILELEE QRSSALKSFN SKNRGRIDFE DGYVPVGIRF FPRDHQVIQP 60 YLLSKILGTK HTPLYPIKDM DLSTFDPNDV VFDERCRANE TYFYAWLVNK RGKGMVQRVV 120 TKRGYWEADG VDVPVYSDRE MKVMVGFKKN WTFYLGTEPE GQKSAWSMTE YRVNPRLIPA 180 DQMNDDVKTR IVSYAVCKIT KA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12977.1 | 1e-21 | NAC family protein |