PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43658.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 507aa MW: 56493.4 Da PI: 6.5142

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.9	1.1e-25	209	293	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +YAk++GFsvrk+k ++ ng i kr f+Cs++g+r++++++ + ++ +r+etrtgC+a+++ + e +gkw+++ + eHnH+l GAY43658.1 209 FYTTYAKRIGFSVRKAKVRRL-SNGAIRKRLFYCSRQGFRAKKQST-KATKYQRKETRTGCDAMVEFTVE-NGKWMISGFTPEHNHDL 293 9**************9998.8899************9999.99999*************9.*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MDEMNDSVSS NPEQFLNDGE RLFNGIAADS NENQGGHDPH PFWKFEAQEG TSTSMLDLDW 60 CWPDEISRPG GHTNNHNSSD CWSAASEAHC LNNNFLPAAA AASDAVFPPL LNVVTDGAEN 120 ADAAVMKRQL QNTEKPLEMV HNSLQHLPSF DTHIVSLESD GESLMSSESN GDEIQSQSTV 180 NLRGEIPEVN SQNPELGMVF SSQEEAYMFY TTYAKRIGFS VRKAKVRRLS NGAIRKRLFY 240 CSRQGFRAKK QSTKATKYQR KETRTGCDAM VEFTVENGKW MISGFTPEHN HDLEGKSKPV 300 VGSSTKVSED HSISTTMNKA ATVKEAQPLN SVGFQDALRT KNIGQLNTRD VYDAYKDAAA 360 AADANGIISV KTQRMESNPS TVNQQEALNY RIKCQLKRKY DNDGRETKSK SSDGAITHCH 420 SFKEVTKGGD YQGSKKHASR SYSVGENSRH SACVSALPPL PSQSTGNQFK DHNKSRLNVQ 480 VRLEETEKER ERLEEIEKEI KSWFQPM

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MDEMNDSVSS NPEQFLNDGE RLFNGIAADS NENQGGHDPH PFWKFEAQEG TSTSMLDLDW  60
CWPDEISRPG GHTNNHNSSD CWSAASEAHC LNNNFLPAAA AASDAVFPPL LNVVTDGAEN  120
ADAAVMKRQL QNTEKPLEMV HNSLQHLPSF DTHIVSLESD GESLMSSESN GDEIQSQSTV  180
NLRGEIPEVN SQNPELGMVF SSQEEAYMFY TTYAKRIGFS VRKAKVRRLS NGAIRKRLFY  240
CSRQGFRAKK QSTKATKYQR KETRTGCDAM VEFTVENGKW MISGFTPEHN HDLEGKSKPV  300
VGSSTKVSED HSISTTMNKA ATVKEAQPLN SVGFQDALRT KNIGQLNTRD VYDAYKDAAA  360
AADANGIISV KTQRMESNPS TVNQQEALNY RIKCQLKRKY DNDGRETKSK SSDGAITHCH  420
SFKEVTKGGD YQGSKKHASR SYSVGENSRH SACVSALPPL PSQSTGNQFK DHNKSRLNVQ  480
VRLEETEKER ERLEEIEKEI KSWFQPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	3e-19	FAR1 family protein