PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43637.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 277aa    MW: 30801.4 Da    PI: 8.8909
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43637.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.79e-0584104323
                 ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                 C++C+k Fs++  L  H++ H
  GAY43637.1  84 CKYCSKKFSNSQALGGHQNAH 104
                 ******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MSARVSCKDF DDKKMKGKME EELLDHSLDL RLNSSDNLEV DHESNLELNL LDRLDINSPK  60
GSSEKSHNAA AKHQVAAAKR LFLCKYCSKK FSNSQALGGH QNAHKRERAT FKKDKEIDNV  120
ITLDQEPNPF IYPYSAMAAA AGLSNHHCYN GSFDRSPLGV NMHSMIHKPH QYHTHHPPLA  180
HRVINGPQFP MHHRSNAYWV PNSGLHQAPL EHVGINLSRA PFGRFESSLS ANSEATTAKN  240
NVAFAGQANF WGAAGPSRNR DQQRDPSATG PNLSLNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.17e-16C2H2 family protein