PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43603.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 271aa    MW: 29280.8 Da    PI: 9.1461
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43603.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19138188255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  GAY43603.1 138 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 188
                 8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MHGHSSSDGS MNMMPSDYAV LDSVRQHLLG ESETGLSSVS SASSKSNGAP PTYCRSSSFS  60
RLYPCLTDNW GDLPLRENDS EDMLVFNFLR DALTVGWVPQ EQLAESDRHQ VAEVAPAPAL  120
PEERGAPAPA VVPSRGKHYR GVRQRPWGKF AAEIRDPAKN GARVWLGTFE TAEDAALAYD  180
RAAYRMRGSR ALLNFPLRIN SGEPEPVRIK SKRSTPEPSS STDSGSVSPK RRRKVAALAS  240
VPVRAGMEMG SGVGQVARVA SCTRGDQPLV S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1229235PKRRRKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.17e-67ERF family protein