PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43602.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 287aa    MW: 31824.3 Da    PI: 6.8899
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16.2e-20154204255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAa+a+++a+ +l+g
  GAY43602.1 154 HYRGVRRRP-WGKYAAEIRDPTRRG--VRVWLGTFDTAIEAARAYDRAAFQLRG 204
                 8********.**********97665..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MATPIEKSAL EFIEQHLFGE NSPIAGFSSS LSSDTCSQSQ TSSSASSDRS FFNDAVFFDY  60
ESKPQIIDLV TPQPTNTCSE LTNDFFEFDI RPQIQSQPSN CSSEFEPKPK ISPNSSSQSS  120
RKPSLKISVP KKAEGHHFTN RKSKAKPESS EEKHYRGVRR RPWGKYAAEI RDPTRRGVRV  180
WLGTFDTAIE AARAYDRAAF QLRGSKAILN FPLEAGKCDS NAAVARECDS SAEAGACETK  240
RKRDCESEEE ERKAKVVKTE SADTVNEFPL TPASCAAEVV FFTYIKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17490.11e-36ERF family protein