PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY43580.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 333aa    MW: 36112.7 Da    PI: 7.2116
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY43580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.85e-1397141347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
       GAY43580.1  97 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKY 141
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKIFGVRL TDGSIRKSAS MGNLSHYAGS TSGHNNNNAS  60
NTPDSPGETP DHHADGYASE DFVPGSSSSR ERKKGVPWTE EEHRMFLLGL QKLGKGDWRG  120
IARNYVVSRT PTQVASHAQK YFIRQSNVSR RKRRSSLFDI VADEPLDTPA ASQDLFSANH  180
TQGETQSNNP LPAPPALDEE CESMDSTNSN DGEPAPPKPE NSQSCIPMVY PAAYVSPFFP  240
FTYPYWSAYN TEPTQKETHE VLKPTAVHSK SPINVDELVG MSKLSLGESI GQNGPSSLSL  300
KLDEGSSRQS AFHANPASGS TGMNSSGSPI HAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-141MYB_related family protein