PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY43180.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 569aa MW: 64881.1 Da PI: 7.0611

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY43180.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	86.3	5.8e-27	402	525	6	128
NAM 6 rFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvgl 102 F Ptd elv+++L +kv++++ e + ik++++y++eP++L ++++++++ yfF++ ++ ++ nr+++ gyW++tg v +k+g +v GAY43180.1 402 AFIPTDTELVTYHLMNKVSARSYEQLDRfIKDIELYDYEPSELSsLAYHSGHDKKYFFTRLSHPAR---TVNRQAQGGYWRKTGMPSYVNNKDGDAVAK 497 69******************7665555**********955777788899*998765...5899999******************* PP NAM 103 kktLvfykgrap..kgektdWvmheyrl 128 k++L+++k+++p k+ekt+W+m+ey l GAY43180.1 498 KTSLTYFKKQDPtsKPEKTHWLMKEYML 525 ***8766511567*******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MEHIETGRVP LRSVNSRDSE VPCKHKKCGL AILFFILEAV SVVLDIFEKS KGASLAAFLF 60 SAFGFAMTIY VCFLERTFTA IKPQADRQLG ILDIAFSVLQ LIATLIHLIL LVSDAKYNYN 120 ASVLFPLAFA IIAVLFVFKE RDTSTDSSRQ DLSPSANDSL LSTPFELYLS GITVEGDNSE 180 NNLRLSGQVQ EGPGIEKFRI IGEAKPGGKL LGYPVNGTTL CTFQWIRFLE DDTRHSIEGA 240 TEPEYVVTAD DINKLIALEH TTIDDEGHEG KLVTVFANEH SKIKCDPDMQ SKVDMHISRG 300 QAAFRVLLLI NSSENTWEPA TLSFTQSRFH VKINSTDVVI SEGDLFNIIE IEIPIGLSRQ 360 FILRRLDGES HYFITNNDRM RDTLVLTMRT FRRMVLPPTV AAFIPTDTEL VTYHLMNKVS 420 ARSYEQLDRF IKDIELYDYE PSELSSLAYH SGHDKKYFFT RLSHPARTVN RQAQGGYWRK 480 TGMPSYVNNK DGDAVAKKTS LTYFKKQDPT SKPEKTHWLM KEYMLLKSQQ PNQNDETPWT 540 LCVLYDFQRK RREGPFKRTE KNLWRRNNC

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MEHIETGRVP LRSVNSRDSE VPCKHKKCGL AILFFILEAV SVVLDIFEKS KGASLAAFLF  60
SAFGFAMTIY VCFLERTFTA IKPQADRQLG ILDIAFSVLQ LIATLIHLIL LVSDAKYNYN  120
ASVLFPLAFA IIAVLFVFKE RDTSTDSSRQ DLSPSANDSL LSTPFELYLS GITVEGDNSE  180
NNLRLSGQVQ EGPGIEKFRI IGEAKPGGKL LGYPVNGTTL CTFQWIRFLE DDTRHSIEGA  240
TEPEYVVTAD DINKLIALEH TTIDDEGHEG KLVTVFANEH SKIKCDPDMQ SKVDMHISRG  300
QAAFRVLLLI NSSENTWEPA TLSFTQSRFH VKINSTDVVI SEGDLFNIIE IEIPIGLSRQ  360
FILRRLDGES HYFITNNDRM RDTLVLTMRT FRRMVLPPTV AAFIPTDTEL VTYHLMNKVS  420
ARSYEQLDRF IKDIELYDYE PSELSSLAYH SGHDKKYFFT RLSHPARTVN RQAQGGYWRK  480
TGMPSYVNNK DGDAVAKKTS LTYFKKQDPT SKPEKTHWLM KEYMLLKSQQ PNQNDETPWT  540
LCVLYDFQRK RREGPFKRTE KNLWRRNNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	1e-16	NAC family protein