PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY42989.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

SRS

Protein Properties

Length: 330aa MW: 36510.9 Da PI: 7.1525

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY42989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	226.4	5.5e-70	110	263	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskr..krelkskkqsalsstklssaeskke 99 g+++CqdCGnqakkdC h+RCRtCCksrgf+C+thvkstWvpaakrrerq+qlaa++++++++++++ +++ ++++++++q++ + +++ +++ GAY42989.1 110 GGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQHQLAALQRHQQQQEQQQLNQQdsQQHHHHHQQQQFRGENPKRQRENQG 208 5789***************************************************999888774443333003333445555566666667778899 PP DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 le+s++P+e+ss+avfrcvrvs++dd +ee+aYqtav+igGhvfkGiLydqG+e+ GAY42989.1 209 LEVSQFPSELSSSAVFRCVRVSAIDDPDEEFAYQTAVHIGGHVFKGILYDQGPEN 263 9**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MAGWFYLGGR EEARSKQEEE EEKEENLYLY RSSANEEIYN STKGFELWPQ YYHQQQENMS 60 NYLSFGVGPS RRSSSNFINA AAASDESSRS GGFVMRQGVG GGGGGGGGGG GGMNCQDCGN 120 QAKKDCPHMR CRTCCKSRGF QCQTHVKSTW VPAAKRRERQ HQLAALQRHQ QQQEQQQLNQ 180 QDSQQHHHHH QQQQFRGENP KRQRENQGLE VSQFPSELSS SAVFRCVRVS AIDDPDEEFA 240 YQTAVHIGGH VFKGILYDQG PENRYTAAAE SSHSQQLNLI TAATATTTTT TGTVAAGTSN 300 PSANLIDPSL YPAPLNAFIA GTQFFPPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	9e-72	SRS family protein