PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY42984.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family DBB
Protein Properties Length: 311aa    MW: 33754.7 Da    PI: 6.6262
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY42984.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.52.3e-07445539
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39
                 C+ +++ e++ fC+ ++  lC+ C    H+        H++
  GAY42984.1  4 QCDVCNKSEASVFCTADEAALCDACDHRVHHAnklaskhHRF 45
                7******99********************6445888886666 PP
2zf-B_box23.21.4e-075692438
    zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38
                ++C+ ++e ++ lfC++++  lC+dC   +H    Ht
  GAY42984.1 56 PICDVCQERRAFLFCQQDRAILCRDCDIPIHTAneHT 92
                68****************************9546665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MKIQCDVCNK SEASVFCTAD EAALCDACDH RVHHANKLAS KHHRFSLLHP SSKHFPICDV  60
CQERRAFLFC QQDRAILCRD CDIPIHTANE HTQKHNRFLL TGVKLSATST LYTSSVSKSN  120
PNGCDSSVPV PDANKSIKKT VVSVAPVNSN PPSNSEISTS SAVTNSNGGN SVIAANECGT  180
VSASSISEYL EMLPGWHVED LLDSSSDPFG FCKGNDGTLP FLDADLDCNL SSFSSERVGI  240
WVPQAPSPVQ TCLYSSQSQT AGHISFKDAK EVTGVKAVSS NRRYTEDVFT VPQISPQLAG  300
FKRSRPNIWE D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.12e-82DBB family protein