PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY42448.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 530aa MW: 60404.8 Da PI: 6.4472 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 68.3 | 2.2e-21 | 9 | 140 | 2 | 128 |
NAM 2 ppGfr..FhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgy.Wkatgkdkevls 94 p Gf+ F Ptde+++ +yL +kv g++l+ +e+ ++++d+y+ + w+ ++++ +e+ +yfF++ +kk+++g++ r+tk g Wk++ +++ + GAY42448.1 9 PSGFKiaFVPTDEQIIRDYLFNKVYGNPLPSDEAiVDHCDLYDEsDDWKK--HFEErGENILYFFTPLKKKSENGSKIDRTTKCGAtWKSQTEKRILDG 105 7777666*********************9998884677799964255554..4444145566******************9996644**9999887777 PP NAM 95 kkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 ++++++g kk L+f k++++ +Wvm ++rl GAY42448.1 106 QSQQHIGSKKNLTFLpKNDDQVKGGMSWVMYQFRL 140 78999**********544444445789******98 PP | |||||||
2 | NAM | 61.4 | 2.9e-19 | 194 | 340 | 4 | 128 |
NAM 4 Gfr..FhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 G++ F+P+de+++ +yL k+ g+ l+ +e+i e+ +y+ ++ w+ + +++e+ +yfF+ ++k++++ r r+tk g+Wk++ + ++ + GAY42448.1 194 GYKilFDPSDEQIIRDYLFGKLCGNGLPSNEAIIECTLYDgCHIWRKQF-QEKGENMLYFFIALRRKSEKDPRIDRVTKCGTWKSQKD-NGIHWSssss 290 55444**********************9999999998885378888763.34566788**************************8855.5555543555 PP NAM 96 .........kgel..vglkktLvfy........kgrapkgektdWvmheyrl 128 + + +g +k + f + ++ ++ +t+Wvmheyrl GAY42448.1 291 ssssstshnN--EvlIGSRKNFSFIpkkcccddHREHAEAGSTTWVMHEYRL 340 5555554444..066**********99888876456666679********98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 530 aa Download sequence |
MSCQNCVLPS GFKIAFVPTD EQIIRDYLFN KVYGNPLPSD EAIVDHCDLY DESDDWKKHF 60 EERGENILYF FTPLKKKSEN GSKIDRTTKC GATWKSQTEK RILDGQSQQH IGSKKNLTFL 120 PKNDDQVKGG MSWVMYQFRL DGILLNNAND IVVCRVSKNV KNKKESKDNN NINNARPIMA 180 PKVMASSNHM LPSGYKILFD PSDEQIIRDY LFGKLCGNGL PSNEAIIECT LYDGCHIWRK 240 QFQEKGENML YFFIALRRKS EKDPRIDRVT KCGTWKSQKD NGIHWSSSSS SSSSSTSHNN 300 EVLIGSRKNF SFIPKKCCCD DHREHAEAGS TTWVMHEYRL GGNVLKQYCK MKFKAECDYV 360 ICRIKKKVKN EEENKNDSNA GPMVPTDNHV SRNMSEVELS DSYWSFAENL PNLFSLSEDA 420 INADYDYFNP NLCICLEDLE DDDDKRVVNG MQEQYASASI AIAPVVSAAR NEQDQPGHHK 480 RFKAADDEEV SLARAKEING LDYKTEETGY LEDLVRSCAY YCGDRRAAGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69490.1 | 1e-13 | NAC family protein |