PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY41936.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

YABBY

Protein Properties

Length: 218aa MW: 24112.7 Da PI: 8.1628

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY41936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	247.2	3.1e-76	12	179	2	170
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesastsvss 98 d+ ssseq+Cyv+C+fC+t+lavsvP tslfk+vtvrCGhCt+llsvn++ a + hl++ + + llee ++ ++ +++ ++ +++s+ GAY41936.1 12 DHLSSSEQLCYVHCTFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPAANQLHLGHPFFTPqnLLEEIRNVPA--NMLMINPPNP-ADQSV 107 7899****************************************98888777777777777777655224444444443..3444443333.44455 PP YABBY 99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + + +++e+p+ p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl GAY41936.1 108 MPVRVVDHQEIPKSPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 179 567889999***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MSSSTPAALS PDHLSSSEQL CYVHCTFCDT VLAVSVPCTS LFKTVTVRCG HCTNLLSVNM 60 RGLLLPAANQ LHLGHPFFTP QNLLEEIRNV PANMLMINPP NPADQSVMPV RVVDHQEIPK 120 SPVVNRPPEK RQRVPSAYNR FIKDEIQRIK AGNPDISHRE AFSAAAKNWA HFPHIHFGLM 180 PSDQPVKKTS VRQQQEGEDA MIKDGFFAPA ANVGVTPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45190.1	1e-100	YABBY family protein