PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 23941.5 Da PI: 6.8023 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 4.8e-19 | 99 | 150 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 gy+GVr+++ +g+++Ae rdp++ng +r +lg++ t+e+Aa a+++a+ kl+g+ GAY41838.1 99 GYRGVRRRP-WGKYAAEMRDPKKNG--ARAWLGTYETPEDAAMAYDRAAFKLRGA 150 8********.***********9998..**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MYGVSSFGFE DPDIGLLESI QEYLLTDDIF EEAPAAIKSE NGEPLTSSPH HSSFMSSLWS 60 DLLPVEDDLA SGSASIVGSN PFDGNVIDSN KHDPRRGVGY RGVRRRPWGK YAAEMRDPKK 120 NGARAWLGTY ETPEDAAMAY DRAAFKLRGA KAKLNFPHLI GSAHCREPIR VNPRRRPQSL 180 DSSSSSSSSS SGTSTTAFSN SKISASASAA VDHQFVINWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 7e-37 | ERF family protein |