PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41837.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 328aa    MW: 36245.7 Da    PI: 4.9248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41837.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.4e-20199249255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr ++ +g+++AeIrdp++ng  +r++lg+++t+e+Aa a+++a+ +++g
  GAY41837.1 199 HYRGVRTRP-WGKYAAEIRDPKKNG--ARVWLGTYDTPEGAALAYDKAAFEMRG 249
                 6*****999.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MYSESISQTD MALLESIRHH LLDDDFEDIN SMMQPLQVED VNSSILQQHQ HQQHQQQQQQ  60
MPLENFSESD FDLLQNLLED VNTASSFESD YLNNAPSVYS PTSSFGSAVF DFPLQVTGNV  120
VINNNNNYPI PSYGCYDHPK ALNDAVDSVG WISFDHHQAD QDDQAISEAA AAAATLDMVT  180
YHQTAGLAAR DRDQAKVVHY RGVRTRPWGK YAAEIRDPKK NGARVWLGTY DTPEGAALAY  240
DKAAFEMRGS KAKLNFPHLL GRVNFKPVRV NTTNTTKRGS PESEPELSPT SSSSSSSSST  300
SSSSSLLMLP EDSPKPKRRN NNGTSAVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-39ERF family protein