PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41836.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 233aa    MW: 25676.5 Da    PI: 6.6912
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-20134184255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp++ng  +r++lg+++t+e+Aa a+++a+ k++g
  GAY41836.1 134 QYRGVRRRP-WGKFAAEIRDPKKNG--ARVWLGTYDTPEGAAFAYDRAAFKMRG 184
                 59*******.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNRENMSESD LALLESIRQQ LLEDDFEIFT TFPSETLPIN NNETLNSPVS SFNSFSFTEN  60
INEYLSQGVS SSSHSSLHDG VNGGWISFDD QLGRNNDIGS AIENIDTSMT SPPHPPPLPT  120
PQMDVARGTH VRMQYRGVRR RPWGKFAAEI RDPKKNGARV WLGTYDTPEG AAFAYDRAAF  180
KMRGSKAKLN FPHLIGSNVE PPVRVTKKRG SPEPPSSSSS LSSSSSVVSF RPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.17e-43ERF family protein