PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY41832.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 26311.9 Da PI: 5.4191 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.2 | 6.6e-21 | 109 | 159 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g++vAeIrdp++ng +r++lg++ t+e+Aa a+++a+ +++g GAY41832.1 109 RYRGVRRRP-WGKFVAEIRDPKKNG--TRIWLGTYNTPEDAALAYDRAAFNMRG 159 69*******.***********9998..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
MYKKNISPSE LALLESISQY LLDDDATSFQ IPISSPSETT INSNETLSFT ENSDVSNDME 60 TYRALHDAIN VGWISFDQID DETDGTSTST TKSTPDRTEV ARDTLVGARY RGVRRRPWGK 120 FVAEIRDPKK NGTRIWLGTY NTPEDAALAY DRAAFNMRGS KAKLNFPHLI GSNVEPVPLG 180 RVTKKRESPE PSSPSSSSSS SSSSSSFTVL SYDSPKPKRR NYGISFCTSD VNWENVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G44840.1 | 2e-41 | ERF family protein |