PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41831.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 154aa MW: 17255.2 Da PI: 9.408 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57 | 5e-18 | 64 | 116 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr++ +g ++AeIrd + k+ +r++lg++ t+e+Aa a+++a+ k++g GAY41831.1 64 HYRGVRRRQ-WGTYAAEIRDS---NpkKKgARVWLGTYKTPEGAALAYDRAAFKMRG 116 7*****887.**********4...454345*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MQNKIIPEAS GSGQQIHIQS DDGYEKTMLC FIKEAGHREG TASQDQNVVE APDTQPPPAK 60 KDRHYRGVRR RQWGTYAAEI RDSNPKKKGA RVWLGTYKTP EGAALAYDRA AFKMRGSKAK 120 LNFPHLLESV CNDESSSSTE PSRDQAEKEL QRHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 3e-34 | ERF family protein |