PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41756.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 26631.9 Da PI: 7.3379 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.4e-18 | 41 | 91 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa +l+g GAY41756.1 41 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALICLKG 91 59*****998.**********9...336***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MVKAEQRIEQ EISSKKMPST SKSKSKSSSS PAAAAGCKKM KKYKGVRMRS WGSWVSEIRA 60 PNQKTRIWLG SYSTAEAAAR AYDAALICLK GSSANLNFPI TSSHYIPDTV MSPKSIQRVA 120 AAAANRFVND NIIDNNATTI DTTTPPISPP LPSSSYLSSS SSSSISSPSL SSSPPDQVDD 180 DVSLMHSLGS YSEPIPMMEP LSWYNFDGIQ SPKYVDQMFS SFDQLLPTID DFLEDGDIRL 240 WSFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-32 | ERF family protein |