PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY41406.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 408aa MW: 45947 Da PI: 7.4038

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY41406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.3e-11	342	387	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L+el+P+ +k + a++L +Av+Y+k+Lq GAY41406.1 342 SIAERVRRTKISERMRKLQELVPNM----DKQTNTADMLDLAVDYVKELQ 387 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MESDLQQHRH HFLHDHQIQH HQKQLNSGLT RYQSAPSSYF SSFLDKDAFE DFLMRPSSPE 60 TERIFARFLS NSAGNTDNTE NTSNSIIPEQ KIIQSDQQQQ QQQLMQLQQQ QQQQQQQQQQ 120 QQSYYQTQPP QPQLQQQNFQ SQNVGMDRFS TQPMKMSGAG AGPGGNNSNL IRHSSSPAGL 180 FSNITIENGY VMMKGMGDYG GGNNTIKRES TSYASSGKPP TGAKPMSPIV EVDNKTSNAG 240 FKEGHNGNYS TGFPMDSWDD SSMMPENIVS EVNRLREDDR TLSGLSATET QSIDLGTRPP 300 PLLAHHLSLP KDIATIEKLL HYQDSVPCKI RAKRGCATHP RSIAERVRRT KISERMRKLQ 360 ELVPNMDKQT NTADMLDLAV DYVKELQCQV KALSDNRAKC TCAKQEQQ

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MESDLQQHRH HFLHDHQIQH HQKQLNSGLT RYQSAPSSYF SSFLDKDAFE DFLMRPSSPE  60
TERIFARFLS NSAGNTDNTE NTSNSIIPEQ KIIQSDQQQQ QQQLMQLQQQ QQQQQQQQQQ  120
QQSYYQTQPP QPQLQQQNFQ SQNVGMDRFS TQPMKMSGAG AGPGGNNSNL IRHSSSPAGL  180
FSNITIENGY VMMKGMGDYG GGNNTIKRES TSYASSGKPP TGAKPMSPIV EVDNKTSNAG  240
FKEGHNGNYS TGFPMDSWDD SSMMPENIVS EVNRLREDDR TLSGLSATET QSIDLGTRPP  300
PLLAHHLSLP KDIATIEKLL HYQDSVPCKI RAKRGCATHP RSIAERVRRT KISERMRKLQ  360
ELVPNMDKQT NTADMLDLAV DYVKELQCQV KALSDNRAKC TCAKQEQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	3e-59	bHLH family protein