PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41405.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 408aa MW: 45947 Da PI: 7.4038 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36 | 1.3e-11 | 342 | 387 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L+el+P+ +k + a++L +Av+Y+k+Lq GAY41405.1 342 SIAERVRRTKISERMRKLQELVPNM----DKQTNTADMLDLAVDYVKELQ 387 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence |
MESDLQQHRH HFLHDHQIQH HQKQLNSGLT RYQSAPSSYF SSFLDKDAFE DFLMRPSSPE 60 TERIFARFLS NSAGNTDNTE NTSNSIIPEQ KIIQSDQQQQ QQQLMQLQQQ QQQQQQQQQQ 120 QQSYYQTQPP QPQLQQQNFQ SQNVGMDRFS TQPMKMSGAG AGPGGNNSNL IRHSSSPAGL 180 FSNITIENGY VMMKGMGDYG GGNNTIKRES TSYASSGKPP TGAKPMSPIV EVDNKTSNAG 240 FKEGHNGNYS TGFPMDSWDD SSMMPENIVS EVNRLREDDR TLSGLSATET QSIDLGTRPP 300 PLLAHHLSLP KDIATIEKLL HYQDSVPCKI RAKRGCATHP RSIAERVRRT KISERMRKLQ 360 ELVPNMDKQT NTADMLDLAV DYVKELQCQV KALSDNRAKC TCAKQEQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51140.1 | 3e-59 | bHLH family protein |