PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY41298.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 195aa    MW: 22009.1 Da    PI: 8.024
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY41298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.23e-082167654
                HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                + +Er+RR+++    + Lr+llP  +    ++K s ++   +A +YI++L
  GAY41298.1 21 KDIERQRRQHLSMLHASLRSLLPLqS---IKGKRSISDHINEARNYINYL 67
                679*********************55...********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MDFVNDGSSD NNNNKKMILR KDIERQRRQH LSMLHASLRS LLPLQSIKGK RSISDHINEA  60
RNYINYLNKN IQELGLKRDK LKNLSELGAV GHGSSNWDNC LQNCVTIHPY SGGVEIVINS  120
VHKEENLKLS KVMEAVLEEG LDVIRCASTQ TDEGFFHTIQ AEVGDLTCVD LRVLQLKLDH  180
SIKGPPKEHV PSSFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.14e-35bHLH family protein