PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY41234.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ARR-B | ||||||||
Protein Properties | Length: 594aa MW: 64268.9 Da PI: 7.7865 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 80.9 | 1.5e-25 | 165 | 218 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp++ Wt LH+rF++a++++ G ekA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ GAY41234.1 165 KPKVAWTDSLHNRFLQAIRHI-GLEKAVPKKILEFMNVPGLTRENVASHLQKYRI 218 799******************.********************************6 PP | |||||||
2 | Myb_DNA-binding | 33.4 | 1.1e-10 | 167 | 217 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 + +WT ++ ++++a++ G + +k+I + m+ g+t++++ s++qky+ GAY41234.1 167 KVAWTDSLHNRFLQAIRHIGLEkaVPKKILEFMNvPGLTRENVASHLQKYR 217 568***********************************************7 PP | |||||||
3 | Response_reg | 59.5 | 1.8e-20 | 6 | 90 | 26 | 109 |
EEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 26 vaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 v +++ + eal++++ ++ +Dl+++D+ mp+m+G+el kei+ee +lp++v+++ + e+ + +al G+ ++ Kp +p++l + GAY41234.1 6 VVTVTRPVEALATVRIQRdIDLVVTDLHMPEMNGIELQKEINEEFTHLPVMVMSSDDRESVIMKALASGVAFYILKPLNPDDLKN 90 5678888999999976666***************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 594 aa Download sequence |
MGRLFVVTVT RPVEALATVR IQRDIDLVVT DLHMPEMNGI ELQKEINEEF THLPVMVMSS 60 DDRESVIMKA LASGVAFYIL KPLNPDDLKN VWQYAMTYKK AKSISIDEIG SFELAGFSAG 120 KFSLDDIVSR SSVNERNKNN KDSKRKASKK DKGKQTKQNA TAPKKPKVAW TDSLHNRFLQ 180 AIRHIGLEKA VPKKILEFMN VPGLTRENVA SHLQKYRIFL KRVAEQGASA MGKNLALRSS 240 FAAGHVSMML QEAHEFSQVR DKQQQMRTSA FLPGYGSGVS ALNGTTFGSI GFPSLGASSS 300 SSVPQPGLMG NQANFPQLLF GNTRNPLYKA NSAGTTCGSS GSNNMEANPL SRGGLAAGRM 360 NQMYQQKSQL RPNPYDNDNI GASSSKGFGI SGWSSSSNTS GLDQNMGTIR NNTYSNYAGI 420 RLNDDGELIP AGQTSLINGS GLNGGYGLIT GTSGIMANAA FGHLTPGASS SSARFDNATY 480 QIPSAFAGVN EQENTSMLSQ LSSQQQYGPG NNAQNDFTNF APINNASVNG NTAQPERFGE 540 GIDLVDLLFD PSDYQFLFQL LEIEDVSDPE LSSIADPLNV YYPSFDQNAS SITN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27070.1 | 3e-46 | ARR-B family protein |