PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY40067.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 246aa    MW: 27845.2 Da    PI: 10.473
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY40067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.71e-11122163351
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                  +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  GAY40067.1 122 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 163
                 79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MVSLRRRKLL GLCSGKSSFV APLPRTSENG NAPENSTQNI RPISLRPSSL DNVSLQRGIA  60
VEKEGPASSN VSGASSPEQR SKKPKEQHVE NEQHFPSFSG LPIKRRKRHR RKQIQNQEPC  120
LMRGVYFKNM KWQAAIKVDK KQIHLGTVGS QEEAARLYDR AAFMCGREPN FELSEEEKQE  180
LRQFKWDEFL AFTRRSITHK KYKRRVGVGS NKRSESPLEE DGDWDSKQGV NGFSASEEAG  240
QDSSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.18e-51ERF family protein