PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY40066.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 246aa MW: 27845.2 Da PI: 10.473 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.7 | 1e-11 | 122 | 163 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ g+ eeAa+++++a+ GAY40066.1 122 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 163 79**98..47*********4.....5********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MVSLRRRKLL GLCSGKSSFV APLPRTSENG NAPENSTQNI RPISLRPSSL DNVSLQRGIA 60 VEKEGPASSN VSGASSPEQR SKKPKEQHVE NEQHFPSFSG LPIKRRKRHR RKQIQNQEPC 120 LMRGVYFKNM KWQAAIKVDK KQIHLGTVGS QEEAARLYDR AAFMCGREPN FELSEEEKQE 180 LRQFKWDEFL AFTRRSITHK KYKRRVGVGS NKRSESPLEE DGDWDSKQGV NGFSASEEAG 240 QDSSAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 8e-51 | ERF family protein |