PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY40065.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 305aa    MW: 34569.4 Da    PI: 10.5701
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY40065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.31.4e-11181222351
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                  +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  GAY40065.1 181 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 222
                 79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MKGGGLVGKV DLFTMKRDFI ILFKNRFWEI LVNLYSKPTV YGKRHQLGHC ALLAIFGSIM  60
VSLRRRKLLG LCSGKSSFVA PLPRTSENGN APENSTQNIR PISLRPSSLD NVSLQRGIAV  120
EKEGPASSNV SGASSPEQRS KKPKEQHVEN EQHFPSFSGL PIKRRKRHRR KQIQNQEPCL  180
MRGVYFKNMK WQAAIKVDKK QIHLGTVGSQ EEAARLYDRA AFMCGREPNF ELSEEEKQEL  240
RQFKWDEFLA FTRRSITHKK YKRRVGVGSN KRSESPLEED GDWDSKQGVN GFSASEEAGQ  300
DSSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.14e-50ERF family protein