PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY39757.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

ERF

Protein Properties

Length: 450aa MW: 48218.8 Da PI: 7.8395

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY39757.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.6	2e-20	217	266	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g GAY39757.1 217 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 266 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MCILNKVANQ RGSVEGSSFP TGSGGEAQDQ QDDQSYGQEN IIESQSGHFQ RATSNQITES 60 PSTAAASLMG YGHAREMSAM VSALTRVVSG QRAATDVGYS ATGFGLASAS ASASVSASPA 120 SASGLWIGHK RGREEAEAAQ LAGSLPRLYR GFGDFRDSSS SSSAGAIITQ EPTSSIAAPA 180 TTATTTTTAT IPTTPSSESS SSGVSYEETS GGERRRRYRG VRQRPWGKWA AEIRDPHKAA 240 RVWLGTFDTA EAAARAYDEA ALRFRGNRAK LNFPENVRIV PPLQPQPQPQ PQPQQHQQVL 300 QNIPTRQTPN FATVATNFHQ QQQQRQLQTA TMPPFFMSQG YQDYFDYSQL LQNQPTSLLE 360 QMLQPQTQTH QIASMQPPLL SSSLSSYSFG PSSSSASSVS SSSASFPLLF GDQQPGFFRP 420 PQNQSQSSGS DFPAPPPPWS HSGHYPPSSG

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MCILNKVANQ RGSVEGSSFP TGSGGEAQDQ QDDQSYGQEN IIESQSGHFQ RATSNQITES  60
PSTAAASLMG YGHAREMSAM VSALTRVVSG QRAATDVGYS ATGFGLASAS ASASVSASPA  120
SASGLWIGHK RGREEAEAAQ LAGSLPRLYR GFGDFRDSSS SSSAGAIITQ EPTSSIAAPA  180
TTATTTTTAT IPTTPSSESS SSGVSYEETS GGERRRRYRG VRQRPWGKWA AEIRDPHKAA  240
RVWLGTFDTA EAAARAYDEA ALRFRGNRAK LNFPENVRIV PPLQPQPQPQ PQPQQHQQVL  300
QNIPTRQTPN FATVATNFHQ QQQQRQLQTA TMPPFFMSQG YQDYFDYSQL LQNQPTSLLE  360
QMLQPQTQTH QIASMQPPLL SSSLSSYSFG PSSSSASSVS SSSASFPLLF GDQQPGFFRP  420
PQNQSQSSGS DFPAPPPPWS HSGHYPPSSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	213	218	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50080.1	5e-13	ERF family protein