PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY39695.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 616aa MW: 69442.2 Da PI: 4.4064

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY39695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.5	5.1e-53	10	136	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ppGfrFhPtdeelv +yLk+k+ +kk+++ ++i+e+d+yk++P++Lp + +k+++++w+fFs+rd+ky++g r+nrat++gyWkatgkd++v++ +++ GAY39695.1 10 PPGFRFHPTDEELVLFYLKRKICKKKIKF-DIISETDVYKWDPEELPgQsLLKSGDRQWFFFSPRDRKYPNGARSNRATRHGYWKATGKDRNVTC-HSR 106 8**************************.99**********96347788999**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kktLvfy+grap+ge+tdWvmhey+l GAY39695.1 107 NVGVKKTLVFYRGRAPTGERTDWVMHEYTL 136 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MKVTSENVWP PGFRFHPTDE ELVLFYLKRK ICKKKIKFDI ISETDVYKWD PEELPGQSLL 60 KSGDRQWFFF SPRDRKYPNG ARSNRATRHG YWKATGKDRN VTCHSRNVGV KKTLVFYRGR 120 APTGERTDWV MHEYTLDEEE LQRCQNISDY YALYKVFKKS GPGPKNGEQY GAPFKEEDWV 180 DDEDLVDTKT VEEIASKELK EVATAHDVKP NGQVPLVLDD FEEFIKQLAD EPLPTETQIN 240 YTYEAPQVVG EEEAQSTLMN ASSREVMFSE PISVCNEQAS FDFTQSASSN LQLYDTSEVT 300 SAPNNFEQVL QIFEEDFLEM DDLIGPQPTV STPEVENLQF NEFDGLSELD LFHDAALFLQ 360 NLEPVDQEEN TNALANNLVN QVDHQFQPQS VVNQVDHQLQ PNLIVNQMNH QLEPNSMGNQ 420 TSHQLQPNLA VSQVDYELQP HSLGAEDISS QQWMHDLCAE DISSQPWMHD QLTNFFTPTE 480 STQGILCPPI SGSIQQSANH PTEANQNQDQ SGQEVGGATS RFASSLWAFV ESIPTTPASA 540 SESPLVNRAL ERMSSFSRMR ITARNPNVAG GDAAALTRRQ ASSNRGFLLL SILGALCAIL 600 WMLMGTMRVL GSCISS

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MKVTSENVWP PGFRFHPTDE ELVLFYLKRK ICKKKIKFDI ISETDVYKWD PEELPGQSLL  60
KSGDRQWFFF SPRDRKYPNG ARSNRATRHG YWKATGKDRN VTCHSRNVGV KKTLVFYRGR  120
APTGERTDWV MHEYTLDEEE LQRCQNISDY YALYKVFKKS GPGPKNGEQY GAPFKEEDWV  180
DDEDLVDTKT VEEIASKELK EVATAHDVKP NGQVPLVLDD FEEFIKQLAD EPLPTETQIN  240
YTYEAPQVVG EEEAQSTLMN ASSREVMFSE PISVCNEQAS FDFTQSASSN LQLYDTSEVT  300
SAPNNFEQVL QIFEEDFLEM DDLIGPQPTV STPEVENLQF NEFDGLSELD LFHDAALFLQ  360
NLEPVDQEEN TNALANNLVN QVDHQFQPQS VVNQVDHQLQ PNLIVNQMNH QLEPNSMGNQ  420
TSHQLQPNLA VSQVDYELQP HSLGAEDISS QQWMHDLCAE DISSQPWMHD QLTNFFTPTE  480
STQGILCPPI SGSIQQSANH PTEANQNQDQ SGQEVGGATS RFASSLWAFV ESIPTTPASA  540
SESPLVNRAL ERMSSFSRMR ITARNPNVAG GDAAALTRRQ ASSNRGFLLL SILGALCAIL  600
WMLMGTMRVL GSCISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-144	NAC family protein