PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY39658.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 160aa MW: 18743.3 Da PI: 9.6263 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 176.4 | 7.9e-55 | 14 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eelv +yLk+k+++ k++l +vi ++d+yk+ePwd+++ + e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+vls k GAY39658.1 14 VPPGFRFHPTEEELVGYYLKRKINSLKIDL-DVIIDIDLYKIEPWDIQArcnLGYDEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLS-K 110 69****************************.99**************953432233677**************************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+g++ktLvfykgrap+g+ktdW+mheyrl GAY39658.1 111 NKLIGMRKTLVFYKGRAPNGSKTDWIMHEYRL 142 99****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
DQKRSSMDQL ESSVPPGFRF HPTEEELVGY YLKRKINSLK IDLDVIIDID LYKIEPWDIQ 60 ARCNLGYDEQ NEWYFFSHKD RKYPTGTRTN RATAAGFWKA TGRDKAVLSK NKLIGMRKTL 120 VFYKGRAPNG SKTDWIMHEY RLQTSENGPI QASYSVFIFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 1e-74 | NAC family protein |