PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY39561.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 164aa MW: 18416.5 Da PI: 9.916 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.9 | 5.2e-18 | 34 | 83 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykG+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g GAY39561.1 34 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTPIAAARAYDTAVFYLRG 83 69*****99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 164 aa Download sequence |
MEGGGCCSTS TSTKSPEKRK PRQQRQHQQQ QEKPYKGIRM RKWGKWVAEI REPNKRSRIW 60 LGSYTTPIAA ARAYDTAVFY LRGPSARLNF PELIFQEDDL RDVSAASIRK KATEVGAKVD 120 ALQAALHAGN SESESNTNSN SNSNSIRLSE KPDLNKFPES SDED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G46768.1 | 5e-49 | ERF family protein |