PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39556.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 326aa    MW: 36910.3 Da    PI: 8.3162
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39556.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM87.82e-27181691128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                 lppG+rFhP++++l+++yL++k ++++      +  ++ ike+d+y++eP +Lp+       +++++++wy + + +  +  g  k r+ k+gyW+  g
  GAY39556.1  18 LPPGCRFHPSEDQLLCYYLTNKNKSTEeedtnlC-DNDLIKELDLYEHEPYELPEttcyayGYRGRKRHWYCYGRVSVVK--G-SKCRKGKNGYWRRRG 112
                 79********************999886666532.3357**************954666543334566777777766554..3.56666789******* PP

         NAM  88 kdkevlsk.......kgel..........vglkktLvfykg.rapkgektdWvmheyrl 128
                 + +ev+++       +  +           g+++++vfy g + +++++t+W+mhey+l
  GAY39556.1 113 RVTEVVVRntssnnyN--NnnnnkrgklvLGTRTSFVFYLGnSLKTAVRTHWLMHEYAL 169
                 ****999866555550..055666777789*********883557788*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MGDPHRSDGN RKMESFSLPP GCRFHPSEDQ LLCYYLTNKN KSTEEEDTNL CDNDLIKELD  60
LYEHEPYELP ETTCYAYGYR GRKRHWYCYG RVSVVKGSKC RKGKNGYWRR RGRVTEVVVR  120
NTSSNNYNNN NNNKRGKLVL GTRTSFVFYL GNSLKTAVRT HWLMHEYALD DHVKASFVLC  180
RIFVKSRGGK SKSEVSLSSG AGESVSAVRH IGIQHDGFLI PDSSEGKVDD DNSIDRRNDT  240
CIYPVRLVSQ LDDHVTSRPA SDASFQFPAG IPSKEQSVGD LEHILEHILA ACVHLKVVGG  300
GFTSQSTTVE RDKFTDPFLV RRSIDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-19NAC family protein