PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY39262.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family WRKY
Protein Properties Length: 336aa    MW: 37611.4 Da    PI: 4.9936
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY39262.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.85.3e-29122181258
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                 +Dgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs+edp+++e+tY+g+H++
  GAY39262.1 122 EDGYSWRKYGQKDILGAKYPRSYYRCTYRntqNCWATKQVQRSDEDPSTFEVTYRGTHTC 181
                 7***************************98899*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MENAWRMEQK TLISELTEGM ELAKQLRVNL GSAETSEVLL RRILSSYEKA LLILNWSGSM  60
GQAQASGVPP ESPISINGSP RSEDFDGALK DNQDSSKKRK TLPRRTDKVK VSFESGLEGP  120
FEDGYSWRKY GQKDILGAKY PRSYYRCTYR NTQNCWATKQ VQRSDEDPST FEVTYRGTHT  180
CFNGSQSVPQ PASPEKHEHK LNHHSDNHQK GSGINSEYLD NKEIASPFSF PTSSLGCMKS  240
NDYCFSSLML DENNFLGGFS SSFIPPAAAE SNFYYISQNQ MNFGDAHNLQ QSESELPELQ  300
STNNSVANSP ILNLDFSIDA AELDSNFPFD NAGFSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-67WRKY family protein