PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY39159.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 690aa MW: 77137.3 Da PI: 6.563

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY39159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27	7.8e-09	455	492	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + GAY39159.1 455 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 492 554459******************************88 PP
2	BELL	118.1	4.1e-38	316	387	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++elqk+k+kLls+leeVd+rY++y++q+++v+ssFeavag g+a++Y +lA+ka+SrhFrcL+d +++qi GAY39159.1 316 EFMELQKRKTKLLSMLEEVDRRYRHYCDQMKAVVSSFEAVAGNGAARVYSALASKAMSRHFRCLRDGVVGQI 387 679*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MARELCEDKS RNIISSGGFC YSDVSSSNPT LHQTHMMNQI QGFEGNHEIF NLTTGMEMIG 60 FSKNLQQHTS DNNSVMWKEF FNNKPAGNNP GPSSSKTINE STTSDHHFYQ HDHQFNKQDF 120 TTGMSETSGE NLIVGHDHSD VAGAWQENNS RLLVDDSSLR CVFPCEGNER PSQGLSLSLS 180 SSNPSSIGLQ SFELRQTNHN DHDHQQDDMR FISSSTSGEG FFGKPAAGIQ QQQQMMQDGF 240 LGKPAIPPNI HHQTGHQFQL RNSKYLAPAQ EILNEFCSLG TKQNDATKLK SNKAKQQWDD 300 ENAGSSSRKQ SLCSLEFMEL QKRKTKLLSM LEEVDRRYRH YCDQMKAVVS SFEAVAGNGA 360 ARVYSALASK AMSRHFRCLR DGVVGQIQAT KKAMGEKDPV APGTSRGETP RLKIIDQTLR 420 QQRAFQQMSM MESHPWRPQR GLPERSVSVL RAWLFEHFLH PYPSDVDKHI LARQTGLSRS 480 QVSNWFINAR VRLWKPMVEE MYLEETKEQD NNMASSDGAT DLDDNSGRPN QTQNPPADQK 540 PTQDQLVRID SECLSSIINN HDKNDANKNP NKALPSHHMQ QNFGSFGAME LDFSSYNQHT 600 VGGVSYANDS ANHQNFNGGS GGVSLTLGLQ QHGGSGVSLA FSPASQSSLF YPRDHIEDCQ 660 QVQYSLLDGE GQNLPYRNLM EAQLLHDLAG

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MARELCEDKS RNIISSGGFC YSDVSSSNPT LHQTHMMNQI QGFEGNHEIF NLTTGMEMIG  60
FSKNLQQHTS DNNSVMWKEF FNNKPAGNNP GPSSSKTINE STTSDHHFYQ HDHQFNKQDF  120
TTGMSETSGE NLIVGHDHSD VAGAWQENNS RLLVDDSSLR CVFPCEGNER PSQGLSLSLS  180
SSNPSSIGLQ SFELRQTNHN DHDHQQDDMR FISSSTSGEG FFGKPAAGIQ QQQQMMQDGF  240
LGKPAIPPNI HHQTGHQFQL RNSKYLAPAQ EILNEFCSLG TKQNDATKLK SNKAKQQWDD  300
ENAGSSSRKQ SLCSLEFMEL QKRKTKLLSM LEEVDRRYRH YCDQMKAVVS SFEAVAGNGA  360
ARVYSALASK AMSRHFRCLR DGVVGQIQAT KKAMGEKDPV APGTSRGETP RLKIIDQTLR  420
QQRAFQQMSM MESHPWRPQR GLPERSVSVL RAWLFEHFLH PYPSDVDKHI LARQTGLSRS  480
QVSNWFINAR VRLWKPMVEE MYLEETKEQD NNMASSDGAT DLDDNSGRPN QTQNPPADQK  540
PTQDQLVRID SECLSSIINN HDKNDANKNP NKALPSHHMQ QNFGSFGAME LDFSSYNQHT  600
VGGVSYANDS ANHQNFNGGS GGVSLTLGLQ QHGGSGVSLA FSPASQSSLF YPRDHIEDCQ  660
QVQYSLLDGE GQNLPYRNLM EAQLLHDLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-135	TALE family protein