PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY38746.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 338aa MW: 38181.8 Da PI: 4.4086 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.4 | 6e-19 | 60 | 113 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k GAY38746.1 60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113 566899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130.6 | 6e-42 | 59 | 151 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++ydalk + ++L++++e+L +e++e GAY38746.1 59 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNYDSLQHDNEALLKEIRE 151 69*************************************************************************************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence |
MKRSLCSSDD SLGALMSICP ATDEQSPRNN QVYSREFQTM LDGLDEEGCL EESGGHVSEK 60 KRRLSVDQVK ALEKNFEVEN KLEPERKVKL AQELGLQPRQ VAVWFQNRRA RWKTKQLERD 120 YGVLKANYDA LKLNYDSLQH DNEALLKEIR ELKSKLNEEN TESNISVKQE ETIVHETDHQ 180 NKATLDRDQE SDDKQAAAVA PPTNVTAISL AAAGNISDEP DQELNYDNGV LGISLFPDLK 240 DGSSDSDSSA ILNNEDNNNF HNSNNSHSPN AAISSSDGVI IQSQPHQLSI NCFEFSKPTY 300 QTQFVKMEEH NFFGDETCNF FSDEQPPSLP WYCSDQWT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 60 | 89 | KKRRLSVDQVKALEKNFEVENKLEPERKVK |
2 | 108 | 116 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22430.1 | 2e-65 | HD-ZIP family protein |