PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY38658.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 286aa    MW: 31709.3 Da    PI: 9.1225
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY38658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.81.2e-183781147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg++T+eEdel+++ + +lG++ W++Ia++++ gRt++++k++w+++
       GAY38658.1 37 RGNFTEEEDELIINFHSLLGNK-WSLIAARLP-GRTDNEIKNYWNTH 81
                     89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGRSPCCEKE HTNKGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDELIIN FHSLLGNKWS  60
LIAARLPGRT DNEIKNYWNT HIKRKLYSRG IDPQTHRPLN SAPVPAPSPG NNNNNNSNKR  120
NNNTSTNTKT DCSNKFEMNV KSNRPVMQLV PEFILSTGRS IGTDKNHNYH SPSSAEDSSN  180
NTSGSGVTTE EAHQELNLEL SIGLPQQPRI INQKPAAGGS YQFFGANTNN NPSTGAAQTG  240
AACLCYNLGF QNSKLACSCS SNPMPMSTII TADNNLHRFY RPPLDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16720.17e-59MYB family protein