PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY38539.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 119aa MW: 13902.8 Da PI: 10.2504 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 38.5 | 3.4e-12 | 2 | 90 | 43 | 128 |
NAM 43 ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ePw++ k++ + + +++yfF++ +kk+ +g+ + + +W+ k+v+s+ +++++ kk + + k ++p+ + W+mhey+l GAY38539.1 2 EPWQIWKQFGGldleDGEDLYFFTRLKKKSVNGSMIDSRVGTRTWQGEDAGKAVVSRnSRKKIDSKKRFQYEKDKSPH--NGCWIMHEYSL 90 89999753333333356689************998887778889****999999998667789********9777766..99*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence |
MEPWQIWKQF GGLDLEDGED LYFFTRLKKK SVNGSMIDSR VGTRTWQGED AGKAVVSRNS 60 RKKIDSKKRF QYEKDKSPHN GCWIMHEYSL NPSLLPQNLR SNDLILYRIR KNGEPAVAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 2e-08 | NAC family protein |