PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY38323.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 350aa MW: 39786.8 Da PI: 7.7236

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY38323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.7	6.8e-51	14	140	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 ppGfrFhP+d+el+v+yL++kv++++l++ + i+evd+yk++Pw+Lpk++ +e+ew+fFs+rd+ky++g+r+nra+ sgyWkatg+dk++ls+ ++e+ GAY38323.1 14 PPGFRFHPSDQELIVYYLQNKVTSRPLPA-SLIAEVDLYKYNPWELPKQALFGEDEWFFFSPRDRKYPNGERPNRAAGSGYWKATGTDKPILSSvGSEN 111 9**************************.89***********88778999*********************************9989999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy+gr p+g ktdW+m+eyrl GAY38323.1 112 LGVKKALVFYTGRPPRGAKTDWMMNEYRL 140 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MEREHNPAAS FQFPPGFRFH PSDQELIVYY LQNKVTSRPL PASLIAEVDL YKYNPWELPK 60 QALFGEDEWF FFSPRDRKYP NGERPNRAAG SGYWKATGTD KPILSSVGSE NLGVKKALVF 120 YTGRPPRGAK TDWMMNEYRL ADTRIKPSKS KGSMRLDDWV LCRVRHKSNM PKSAWEIHGT 180 QRAEFVNYSP RTEMARPAYV NHNDDMIRDC LTKDCRLLAS ILAGQALPPI ETFSSLSCQG 240 SNNGNSSTPA YEECAPSGVN SPLTVSSKDT LFNPLKRKPS EENWCENLLP FNKKSICDNK 300 DLDFPISKAL PNHGIDYYSQ CQEGIYNNPS DTLIDFPELN ELAFTSKYLQ

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MEREHNPAAS FQFPPGFRFH PSDQELIVYY LQNKVTSRPL PASLIAEVDL YKYNPWELPK  60
QALFGEDEWF FFSPRDRKYP NGERPNRAAG SGYWKATGTD KPILSSVGSE NLGVKKALVF  120
YTGRPPRGAK TDWMMNEYRL ADTRIKPSKS KGSMRLDDWV LCRVRHKSNM PKSAWEIHGT  180
QRAEFVNYSP RTEMARPAYV NHNDDMIRDC LTKDCRLLAS ILAGQALPPI ETFSSLSCQG  240
SNNGNSSTPA YEECAPSGVN SPLTVSSKDT LFNPLKRKPS EENWCENLLP FNKKSICDNK  300
DLDFPISKAL PNHGIDYYSQ CQEGIYNNPS DTLIDFPELN ELAFTSKYLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	2e-79	NAC family protein