PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY37691.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 701aa MW: 75676.4 Da PI: 6.1219

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY37691.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.2	3e-32	282	339	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers +++++ei+Y+g Hnh+k GAY37691.1 282 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSL-EGHITEIIYKGAHNHPK 339 7**************************************.*************85 PP
2	WRKY	103.8	9.6e-33	494	552	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ GAY37691.1 494 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 552 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MVMAGIDDNM AVIGDWVPPS PSPRTFFAAI SGDDISSREP PSENGADGLS LGSQEQMTSG 60 NTEKKNMMTG GASTDLGPFS EQKSRLAARA GFNAPRLNTE SIRTSDLSLN PDIRSPYLTI 120 PPGLSPTTLL ESPVFLSNSL AQPSPTTGKF SFIPNGNGKS STCISEAPDK SKDNILEDIN 180 TSFAFKPVAE SGSFSLGTRN KATKFHSQYR NSLSLQVQTD FSRATTEKDN GCNTILADQR 240 VFDTFGGSTE HSPPLDEQQD EEGDQRGSGD SMVAGAGGAS SEDGYNWRKY GQKQVKGSEY 300 PRSYYKCTHP NCQVKKKVER SLEGHITEII YKGAHNHPKP PPNRRSAIGS NPLDMQLDIH 360 EQAGLQSGAD GDPSWANTQK GTAGGTPEWR HDTVEVTSAA PVGPEYCNQS SALPAQNGTP 420 YESGDAVDAS STFSNDEDED DQATHCSVGF DGEEDESESK RRKIEAYATE MSGATRAIRE 480 PRVVVQTTSE VDILDDGYRW RKYGQKVVKG NPNPRSYYKC TSAGCTVRKH VERASHDLKS 540 VITTYEGKHN HDVPAARNSS HVNSGSSSAV AAHAAAAGQI HRPEPSQLHN SMARFDRPAS 600 FGSFRVPGRQ QFGPSPGFSF GMHQPGLANL SMAGLGPGQP ELPVLPVHPY LAQQRQVNEM 660 GFMMPKGEPK VEPMSEPGLN LSNRSAVYQQ LMSRLPLGPQ M

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MVMAGIDDNM AVIGDWVPPS PSPRTFFAAI SGDDISSREP PSENGADGLS LGSQEQMTSG  60
NTEKKNMMTG GASTDLGPFS EQKSRLAARA GFNAPRLNTE SIRTSDLSLN PDIRSPYLTI  120
PPGLSPTTLL ESPVFLSNSL AQPSPTTGKF SFIPNGNGKS STCISEAPDK SKDNILEDIN  180
TSFAFKPVAE SGSFSLGTRN KATKFHSQYR NSLSLQVQTD FSRATTEKDN GCNTILADQR  240
VFDTFGGSTE HSPPLDEQQD EEGDQRGSGD SMVAGAGGAS SEDGYNWRKY GQKQVKGSEY  300
PRSYYKCTHP NCQVKKKVER SLEGHITEII YKGAHNHPKP PPNRRSAIGS NPLDMQLDIH  360
EQAGLQSGAD GDPSWANTQK GTAGGTPEWR HDTVEVTSAA PVGPEYCNQS SALPAQNGTP  420
YESGDAVDAS STFSNDEDED DQATHCSVGF DGEEDESESK RRKIEAYATE MSGATRAIRE  480
PRVVVQTTSE VDILDDGYRW RKYGQKVVKG NPNPRSYYKC TSAGCTVRKH VERASHDLKS  540
VITTYEGKHN HDVPAARNSS HVNSGSSSAV AAHAAAAGQI HRPEPSQLHN SMARFDRPAS  600
FGSFRVPGRQ QFGPSPGFSF GMHQPGLANL SMAGLGPGQP ELPVLPVHPY LAQQRQVNEM  660
GFMMPKGEPK VEPMSEPGLN LSNRSAVYQQ LMSRLPLGPQ M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein