PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY37690.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 723aa MW: 78073.9 Da PI: 6.0041

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY37690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.1	3.2e-32	304	361	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers +++++ei+Y+g Hnh+k GAY37690.1 304 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSL-EGHITEIIYKGAHNHPK 361 7**************************************.*************85 PP
2	WRKY	103.7	1e-32	516	574	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ GAY37690.1 516 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 574 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
MVMAGIDDNM AVIGDWVPPS PSPRTFFAAI SGDDISSREP PSENGADGLS LGSQEQMTSG 60 NTEKKNMMTG GASTDLGPFS EQKSRLAARA GFNAPRLNTE SIRTSDLSLN PDIRSPYLTI 120 PPGLSPTTLL ESPVFLSNSL AQPSPTTGKF SFIPNGNGKS STCISEAPDK SKDNILEDIN 180 TSFAFKPVAE SGSFSLGTRN KQSFPSIEVS VQSENSHQSQ NVNAAKFHSQ YRNSLSLQVQ 240 TDFSRATTEK DNGCNTILAD QRVFDTFGGS TEHSPPLDEQ QDEEGDQRGS GDSMVAGAGG 300 ASSEDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCQVKKKV ERSLEGHITE IIYKGAHNHP 360 KPPPNRRSAI GSNPLDMQLD IHEQAGLQSG ADGDPSWANT QKGTAGGTPE WRHDTVEVTS 420 AAPVGPEYCN QSSALPAQNG TPYESGDAVD ASSTFSNDED EDDQATHCSV GFDGEEDESE 480 SKRRKIEAYA TEMSGATRAI REPRVVVQTT SEVDILDDGY RWRKYGQKVV KGNPNPRSYY 540 KCTSAGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHVNSGSSS AVAAHAAAAG 600 QIHRPEPSQL HNSMARFDRP ASFGSFRVPG RQQFGPSPGF SFGMHQPGLA NLSMAGLGPG 660 QPELPVLPVH PYLAQQRQVN EMGFMMPKGE PKVEPMSEPG LNLSNRSAVY QQLMSRLPLG 720 PQM

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

MVMAGIDDNM AVIGDWVPPS PSPRTFFAAI SGDDISSREP PSENGADGLS LGSQEQMTSG  60
NTEKKNMMTG GASTDLGPFS EQKSRLAARA GFNAPRLNTE SIRTSDLSLN PDIRSPYLTI  120
PPGLSPTTLL ESPVFLSNSL AQPSPTTGKF SFIPNGNGKS STCISEAPDK SKDNILEDIN  180
TSFAFKPVAE SGSFSLGTRN KQSFPSIEVS VQSENSHQSQ NVNAAKFHSQ YRNSLSLQVQ  240
TDFSRATTEK DNGCNTILAD QRVFDTFGGS TEHSPPLDEQ QDEEGDQRGS GDSMVAGAGG  300
ASSEDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCQVKKKV ERSLEGHITE IIYKGAHNHP  360
KPPPNRRSAI GSNPLDMQLD IHEQAGLQSG ADGDPSWANT QKGTAGGTPE WRHDTVEVTS  420
AAPVGPEYCN QSSALPAQNG TPYESGDAVD ASSTFSNDED EDDQATHCSV GFDGEEDESE  480
SKRRKIEAYA TEMSGATRAI REPRVVVQTT SEVDILDDGY RWRKYGQKVV KGNPNPRSYY  540
KCTSAGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHVNSGSSS AVAAHAAAAG  600
QIHRPEPSQL HNSMARFDRP ASFGSFRVPG RQQFGPSPGF SFGMHQPGLA NLSMAGLGPG  660
QPELPVLPVH PYLAQQRQVN EMGFMMPKGE PKVEPMSEPG LNLSNRSAVY QQLMSRLPLG  720
PQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein