PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY37477.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Nin-like
Protein Properties Length: 283aa    MW: 31912.9 Da    PI: 4.9439
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY37477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK772.1e-24191241252
      RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 + +++l dl  yF+lpi++AA+ +++c+Tv+K+iCR+ G++RWPhRkiks+
  GAY37477.1 191 TGKLTLRDLMIYFHLPIEEAARRMKLCPTVVKKICRRDGLHRWPHRKIKSI 241
                 5689*********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MADPRAIVPY HDPHDNSYTE DIFNFINNPN PTFADLSLFE EPSSIPHSTN NPQSGGIITD  60
AGDPFDDPLF WDIGNNCNAG SFQAGPSGNQ AEMSDRGTPA IENAANMKAF PRWPVPPEPY  120
LCSCCLKSIE NVKEYLVQYC EERKQAGFMM LPDPLSDFYE AVCVGLDLDD NLTTDDYSQP  180
PMTNSVQRER TGKLTLRDLM IYFHLPIEEA ARRMKLCPTV VKKICRRDGL HRWPHRKIKS  240
IQRRMSVASG RLRSNDAEER ANAQIEIQRL QEEMAAACAG LTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.16e-11Nin-like family protein