PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY37287.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 190aa MW: 21657.6 Da PI: 9.8426 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.2 | 6.9e-19 | 43 | 97 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++t eq + Le+ F+ + +++ ++++ LA++l+L+ rqV vWFqNrRa+ k GAY37287.1 43 RKKLRLTIEQSRLLEDSFKLHTTLNSSQKQALAEQLNLEPRQVEVWFQNRRARTK 97 6778899**********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 118 | 5.3e-38 | 43 | 131 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+ eq++lLE+sF+ +++L++++K++la++L+l+prqv+vWFqnrRARtk+kq E+d+e+Lk+++++l++en+rL+ke +eL++ GAY37287.1 43 RKKLRLTIEQSRLLEDSFKLHTTLNSSQKQALAEQLNLEPRQVEVWFQNRRARTKLKQNEVDCEFLKKCCESLTDENKRLKKELQELQS 131 69*************************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MAARPSLKFG YHLVLLLATD GIDFDFDDGV GNSNSKRINI SGRKKLRLTI EQSRLLEDSF 60 KLHTTLNSSQ KQALAEQLNL EPRQVEVWFQ NRRARTKLKQ NEVDCEFLKK CCESLTDENK 120 RLKKELQELQ SAKAGASSPL FIQLQKATTC PSCEKIMRTS DEGKNAGVNT DVVLKNNKWQ 180 RRFNATNEPN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 92 | 100 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 1e-54 | HD-ZIP family protein |