PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY37097.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 220aa MW: 25056.2 Da PI: 9.6201 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 87.5 | 2.5e-27 | 4 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 +p+GfrF+Ptdeel+ + L+ kv+g++++l+ i e ++y++eP++L+ ++ e+e y ++ r++ + + + +g Wkat + k+++++ + GAY37097.1 4 VPKGFRFNPTDEELI-QILESKVSGQQMPLHFSfIVERKLYELEPQQLQ-SL--PENERYCYCMRENDS------REVSGRGWWKATSHVKKIYATnnN 92 589************.88*********8885445**************8.33..67899*****98853......347789**************8551 PP NAM 97 gel.....vglkktLvfy....kg.rapkgektdWvmheyrl 128 +g k+ L+f+ +g +++++ kt+W+mhey+l GAY37097.1 93 --GscadvIGYKRPLTFHkfknNGrNRSNAIKTNWIMHEYTL 132 ..245555**********6665342556778*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MMMVPKGFRF NPTDEELIQI LESKVSGQQM PLHFSFIVER KLYELEPQQL QSLPENERYC 60 YCMRENDSRE VSGRGWWKAT SHVKKIYATN NNGSCADVIG YKRPLTFHKF KNNGRNRSNA 120 IKTNWIMHEY TLHSLSTINR RLIERDLGSP NLDIGPTIAP SVTLFVIVVV VVVLLLVIVV 180 VVLLMFKYCL LSRTIGALGN NICNFGGFGG GDVSVFVLRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.1 | 2e-19 | NAC family protein |