PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36823.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 277aa    MW: 31274.6 Da    PI: 9.0589
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36823.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.71.2e-09145192455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i  ++  L++l+P +     k   Ka iL + ++Y++ Lq
  GAY36823.1 145 SHSLAERVRRAKISARMKLLQSLVPGC----EKITGKALILDEIIKYVRTLQ 192
                 8*************************9....677****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MAAFSPYQEP TFVFDSFLVP TASNKMRSNA VEGTTFGTKT YFAPMLANEC SQEIPLHAQI  60
HETRGLLDHN TEVATGEHQV SQMVTSMEEK NMRNIVDIKK EKERKYNIGV LKKPRCKKQK  120
KLAEEAASPS GYVHVRARRG QATDSHSLAE RVRRAKISAR MKLLQSLVPG CEKITGKALI  180
LDEIIKYVRT LQTQLEFLAA KLASVTPMFS DSGVDFTTSP LAHQEDNNGN LLRGNDHDGR  240
IQELANADLY ELVNFQSLYW RMQNLERNVQ LSAFERA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104119RKYNIGVLKKPRCKKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.29e-42bHLH family protein