PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY36797.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28140.8 Da PI: 9.332 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.2 | 2.3e-51 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+k+ + +l++ ++i+evd++k++PwdLp v +e yfFs+r+ ky++g+r+nrat sgyWkatg dk++ ++ +++ GAY36797.1 14 LPPGFRFHPTDEELVVQYLKRKIFACPLPA-SIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSrGNQ 108 79****************************.89***************554...4699**********************************9985677 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfy+g+ p+g++tdW+mheyrl GAY36797.1 109 IVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 138 7***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MEKINFMKNG VLRLPPGFRF HPTDEELVVQ YLKRKIFACP LPASIIPEVD VCKSDPWDLP 60 GDVAQERYFF STREAKYPNG NRSNRATGSG YWKATGLDKQ IATSRGNQIV GMKKTLVFYR 120 GKPPHGSRTD WIMHEYRLVT AANAPQKKNF AQTPAVATDN WVLCRIFLKK RGAKSEDEET 180 CTEIGGTRAN GPKPVFYDFM RKEERADLNL VPTSSSSGSS GVTEVSSNES DDHEESSCNS 240 FPYFRRKQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-102 | NAC family protein |